[NeXus-code-tickets] [NeXusCode] #76: The testsuite of NeXus-4rc3 fails on RedHat Enterprise Linux ES release 3 (Taroon Update 8)

NeXus Data Format Library and Applications noreply at nexusformat.org
Wed May 23 14:47:46 BST 2007


#76: The testsuite of NeXus-4rc3 fails on RedHat Enterprise Linux ES release 3
(Taroon Update 8)
--------------------+-------------------------------------------------------
 Reporter:  Rwong   |       Owner:  Freddie Akeroyd
     Type:  defect  |      Status:  new            
 Priority:  major   |   Milestone:                 
Component:  napi    |     Version:  4.0rc3         
 Keywords:          |  
--------------------+-------------------------------------------------------
 The testsuite.log is as follows:



 ## -------------------------------- ##
 ## NeXus Library 4.0rc3 test suite. ##
 ## -------------------------------- ##

 testsuite: command line was:
   $ ./testsuite

 ## ----------- ##
 ## ChangeLogs. ##
 ## ----------- ##

 testsuite: ../ChangeLog:
 | 2007-05-16 16:18  Freddie Akeroyd <F.A.Akeroyd at rl.ac.uk>
 |
 |       * .: Creating 4.0rc3 tag. Refs #36.
 |
 | 2007-05-16 16:02  Freddie Akeroyd <F.A.Akeroyd at rl.ac.uk>
 |
 |       * branches/4.0/NEWS: Update release notes. Refs #36.
 |
 | 2007-04-20 15:28  Freddie Akeroyd <F.A.Akeroyd at rl.ac.uk>
 |

 ## --------- ##
 ## Platform. ##
 ## --------- ##

 hostname = grid-data.rl.ac.uk
 uname -m = i686
 uname -r = 2.4.21-47.0.1.ELsmp
 uname -s = Linux
 uname -v = #1 SMP Fri Oct 13 17:56:20 EDT 2006

 /usr/bin/uname -p = unknown
 /bin/uname -X     = unknown

 /bin/arch              = i686
 /usr/bin/arch -k       = unknown
 /usr/convex/getsysinfo = unknown
 hostinfo               = unknown
 /bin/machine           = unknown
 /usr/bin/oslevel       = unknown
 /bin/universe          = unknown

 PATH: /home/rw33/tmp.d/nexus-4.0rc3/test
 PATH: /usr/local/Cluster-Apps/lsf/6.1/linux2.4-glibc2.3-x86/bin
 PATH: /usr/local/Cluster-Apps/lsf/6.1/linux2.4-glibc2.3-x86/etc
 PATH: /usr/local/Cluster-Apps/Modules/bin
 PATH: /usr/kerberos/bin
 PATH: /usr/local/bin
 PATH: /bin
 PATH: /usr/bin
 PATH: /usr/X11R6/bin
 PATH: /home/rw33/tmp.d/nexus-4.0rc3
 PATH: /usr/local/vdt/globus/bin
 PATH: /usr/local/vdt/globus/sbin
 PATH: /usr/local/Cluster-Apps/gm-2.0.8/bin
 PATH: /usr/local/Cluster-Apps/cluster-tools-0.9/bin
 PATH: /usr/local/Cluster-Apps/cluster-tools-0.9/sbin
 PATH: /usr/local/Cluster-Apps/mpich-1.2.5..10-intel/bin
 PATH: /usr/local/applications/bioinformatics/EMBOSS-2.8.0/LINUX/bin



 testsuite: atconfig:
 | # Configurable variable values for building test suites.
 | # Generated by ./config.status.
 | # Copyright (C) 2000, 2001, 2003 Free Software Foundation, Inc.
 |
 | # The test suite will define top_srcdir=/../.. etc.
 | at_testdir='test'
 | abs_builddir='/home/rw33/tmp.d/nexus-4.0rc3/test'
 | at_srcdir='.'
 | abs_srcdir='/home/rw33/tmp.d/nexus-4.0rc3/test'
 | at_top_srcdir='..'
 | abs_top_srcdir='/home/rw33/tmp.d/nexus-4.0rc3/test/..'
 | at_top_builddir='../'
 | abs_top_builddir='/home/rw33/tmp.d/nexus-4.0rc3/test/../.'
 |
 | AUTOTEST_PATH='test'
 |
 | SHELL=${CONFIG_SHELL-'/bin/sh'}

 testsuite: atlocal:
 | #!/bin/sh
 | #
 | # $Id: atlocal.in 916 2007-04-02 12:28:23Z Freddie Akeroyd $
 | #
 | # test/atlocal.  Generated from atlocal.in by configure.
 | #
 | SETUP_TEST="sh $abs_srcdir/setup_test $abs_srcdir"
 | export SETUP_TEST
 | #
 | if test ! -z ""; then
 |     HAVE_HDF4="napi_test-hdf4-static -q"
 | else
 |     HAVE_HDF4=skip_test
 | fi
 | export HAVE_HDF4
 | #
 | if test ! -z "/home/rw33/tmp.d/hdf5-1.6.5/hdf5/"; then
 |     HAVE_HDF5="napi_test-hdf5-static -q"
 | else
 |     HAVE_HDF5=skip_test
 | fi
 | export HAVE_HDF5
 | #
 | if test ! -z ""; then
 |     HAVE_XML="napi_test-xml-static -q"
 | else
 |     HAVE_XML=skip_test
 | fi
 | export HAVE_XML
 | #
 | if test ! -z ""; then
 |     HAVE_F77=run_test
 | else
 |     HAVE_F77=skip_test
 | fi
 | export HAVE_F77
 | #
 | if test ! -z ""; then
 |     HAVE_F90=run_test
 | else
 |     HAVE_F90=skip_test
 | fi
 | export HAVE_F90
 | #
 | if test -f nxsummary; then
 |     HAVE_NXSUMMARY=run_test
 | else
 |     HAVE_NXSUMMARY=skip_test
 | fi
 | export HAVE_NXSUMMARY
 | #
 | if test -f nxtranslate; then
 |     HAVE_NXTRANSLATE=run_test
 | else
 |     HAVE_NXTRANSLATE=skip_test
 | fi
 | export HAVE_NXTRANSLATE
 | #

 ## ---------------- ##
 ## Tested programs. ##
 ## ---------------- ##

 ## ------------------ ##
 ## Running the tests. ##
 ## ------------------ ##
 testsuite: starting at: Wed May 23 14:29:33 BST 2007
 1. Check the HDF4 binding (testsuite.at:29): skipped (testsuite.at:71)
 2. Check the HDF5 binding (testsuite.at:74): ok (0m0.060s 0m0.080s)
 3. Check the HDF4 binding (static library) (testsuite.at:119): skipped
 (testsuite.at:161)
 4. Check the HDF5 binding (static library) (testsuite.at:164): ok
 (0m0.010s 0m0.030s)
 5. Check the XML binding (testsuite.at:209): skipped (testsuite.at:251)
 6. Check the XML binding (static library) (testsuite.at:254): skipped
 (testsuite.at:296)
 7. Check the F77 binding using HDF4. (testsuite.at:301): skipped
 (testsuite.at:334)
 8. Check the F77 binding using HDF5. (testsuite.at:337): skipped
 (testsuite.at:370)
 9. Check the F90 binding using HDF5. (testsuite.at:373): skipped
 (testsuite.at:407)
 10. Checking HDF4 -> HDF4  (testsuite.at:411): skipped (testsuite.at:415)
 11. Checking HDF4 -> HDF5  (testsuite.at:417): skipped (testsuite.at:421)
 12. Checking HDF4 -> XML  (testsuite.at:423): skipped (testsuite.at:427)
 13. Checking HDF5 -> HDF4  (testsuite.at:429): skipped (testsuite.at:433)
 14. Checking HDF5 -> HDF5  (testsuite.at:435): ok       (0m0.000s
 0m0.030s)
 15. Checking HDF5 -> XML  (testsuite.at:441): skipped (testsuite.at:445)
 16. Checking XML -> HDF4  (testsuite.at:447): skipped (testsuite.at:451)
 17. Checking XML -> HDF5  (testsuite.at:453): skipped (testsuite.at:457)
 18. Checking XML -> XML  (testsuite.at:459): skipped (testsuite.at:463)
 19. Checking HDF4 test file (testsuite.at:467): skipped (testsuite.at:470)
 21. Checking XML test file (testsuite.at:477): skipped (testsuite.at:480)
 22. Checking HDF4 test file (testsuite.at:484): skipped (testsuite.at:494)
 23. Checking HDF5 test file (testsuite.at:496): ok      (0m0.000s
 0m0.060s)
 24. Checking XML test file (testsuite.at:508): skipped (testsuite.at:518)
 25. Checking HDF4 test file (testsuite.at:522): skipped (testsuite.at:526)
 26. Checking HDF5 test file (testsuite.at:528): ok      (0m0.000s
 0m0.030s)
 27. Checking XML test file (testsuite.at:534): skipped (testsuite.at:538)
 testsuite: ending at: Wed May 23 14:29:37 BST 2007
 testsuite: test suite duration: 0h 0m 4s

 ## ------------- ##
 ## Test results. ##
 ## ------------- ##

 ERROR: 6 tests were run,
 1 failed unexpectedly.
 21 tests were skipped.

 ## ------------------------ ##
 ## Summary of the failures. ##
 ## ------------------------ ##
 Failed tests:
 NeXus Library 4.0rc3 test suite test groups:

  NUM: FILENAME:LINE      TEST-GROUP-NAME
       KEYWORDS

   20: testsuite.at:472   Checking HDF5 test file

 Skipped tests:
 NeXus Library 4.0rc3 test suite test groups:

  NUM: FILENAME:LINE      TEST-GROUP-NAME
       KEYWORDS

    1: testsuite.at:29    Check the HDF4 binding
    3: testsuite.at:119   Check the HDF4 binding (static library)
    5: testsuite.at:209   Check the XML binding
    6: testsuite.at:254   Check the XML binding (static library)
    7: testsuite.at:301   Check the F77 binding using HDF4.
    8: testsuite.at:337   Check the F77 binding using HDF5.
    9: testsuite.at:373   Check the F90 binding using HDF5.
   10: testsuite.at:411   Checking HDF4 -> HDF4
   11: testsuite.at:417   Checking HDF4 -> HDF5
   12: testsuite.at:423   Checking HDF4 -> XML
   13: testsuite.at:429   Checking HDF5 -> HDF4
   15: testsuite.at:441   Checking HDF5 -> XML
   16: testsuite.at:447   Checking XML -> HDF4
   17: testsuite.at:453   Checking XML -> HDF5
   18: testsuite.at:459   Checking XML -> XML
   19: testsuite.at:467   Checking HDF4 test file
   21: testsuite.at:477   Checking XML test file
   22: testsuite.at:484   Checking HDF4 test file
   24: testsuite.at:508   Checking XML test file
   25: testsuite.at:522   Checking HDF4 test file
   27: testsuite.at:534   Checking XML test file

 ## ---------------------- ##
 ## Detailed failed tests. ##
 ## ---------------------- ##

 20. testsuite.at:472: testing ...
 testsuite.at:475: $HAVE_HDF5 && $HAVE_NXSUMMARY && nxsummary --config NONE
 NXtest.h5 | sed -e 's/\r$//'
 --- -   2007-05-23 14:29:36.797187000 +0100
 +++ /home/rw33/tmp.d/nexus-4.0rc3/test/testsuite.dir/at-stdout  2007-05-23
 14:29:36.000000000 +0100
 @@ -1,2 +1,3 @@
 +LIBXML2 tree support not present. Using default preferences.
  SAMPLE:

 20. testsuite.at:472: 20. Checking HDF5 test file (testsuite.at:472):
 FAILED (testsuite.at:475)


 ## -------------- ##
 ## ..//config.log ##
 ## -------------- ##
 | This file contains any messages produced by compilers while
 | running configure, to aid debugging if configure makes a mistake.
 |
 | It was created by NeXus Library configure 4.0rc3, which was
 | generated by GNU Autoconf 2.59.  Invocation command line was
 |
 |   $ ./configure --prefix=/home/rw33/tmp.d/nexus-4rc3-dist/ --with-cxx
 --without-fortran --with-hdf5=/home/rw33/tmp.d/hdf5-1.6.5/hdf5/ CC=gcc
 CXX=g++ --with-java-home=/home/rw33/tmp.d/jdk1.6.0_01
 JAVAC=/home/rw33/tmp.d/jdk1.6.0_01/bin/javac
 JAVA=/home/rw33/tmp.d/jdk1.6.0_01/bin/java
 JAVAH=/home/rw33/tmp.d/jdk1.6.0_01/bin/javah
 |
 | ## --------- ##
 | ## Platform. ##
 | ## --------- ##
 |
 | hostname = grid-data.rl.ac.uk
 | uname -m = i686
 | uname -r = 2.4.21-47.0.1.ELsmp
 | uname -s = Linux
 | uname -v = #1 SMP Fri Oct 13 17:56:20 EDT 2006
 |
 | /usr/bin/uname -p = unknown
 | /bin/uname -X     = unknown
 |
 | /bin/arch              = i686
 | /usr/bin/arch -k       = unknown
 | /usr/convex/getsysinfo = unknown
 | hostinfo               = unknown
 | /bin/machine           = unknown
 | /usr/bin/oslevel       = unknown
 | /bin/universe          = unknown
 |
 | PATH: /usr/local/Cluster-Apps/lsf/6.1/linux2.4-glibc2.3-x86/bin
 | PATH: /usr/local/Cluster-Apps/lsf/6.1/linux2.4-glibc2.3-x86/etc
 | PATH: /usr/local/Cluster-Apps/Modules//bin
 | PATH: /usr/kerberos/bin
 | PATH: /usr/local/bin
 | PATH: /bin
 | PATH: /usr/bin
 | PATH: /usr/X11R6/bin
 | PATH: .
 | PATH: /usr/local/vdt/globus/bin
 | PATH: /usr/local/vdt/globus/sbin
 | PATH: /usr/local/Cluster-Apps/gm-2.0.8/bin/
 | PATH: /usr/local/Cluster-Apps/cluster-tools-0.9/bin
 | PATH: /usr/local/Cluster-Apps/cluster-tools-0.9/sbin
 | PATH: /usr/local/Cluster-Apps/mpich-1.2.5..10-intel/bin/
 | PATH: /home/rw33/bin
 | PATH: /usr/local/applications/bioinformatics/EMBOSS-2.8.0/LINUX/bin
 | PATH: /home/rw33/tmp.d/cmake-2.4.3-Linux-i386/bin
 |
 |
 | ## ----------- ##
 | ## Core tests. ##
 | ## ----------- ##
 |
 | configure:1596: checking build system type
 | configure:1614: result: i686-redhat-linux-gnu
 | configure:1622: checking host system type
 | configure:1636: result: i686-redhat-linux-gnu
 | configure:1644: checking target system type
 | configure:1658: result: i686-redhat-linux-gnu
 | configure:1673: checking for egrep
 | configure:1683: result: grep -E
 | configure:1711: checking for a BSD-compatible install
 | configure:1766: result: /usr/bin/install -c
 | configure:1777: checking whether build environment is sane
 | configure:1820: result: yes
 | configure:1885: checking for gawk
 | configure:1901: found /bin/gawk
 | configure:1911: result: gawk
 | configure:1921: checking whether make sets $(MAKE)
 | configure:1941: result: yes
 | configure:2178: checking for gcc
 | configure:2204: result: gcc
 | configure:2448: checking for C compiler version
 | configure:2451: gcc --version </dev/null >&5
 | gcc (GCC) 3.2.3 20030502 (Red Hat Linux 3.2.3-58)
 | Copyright (C) 2002 Free Software Foundation, Inc.
 | This is free software; see the source for copying conditions.  There is
 NO
 | warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
 PURPOSE.
 |
 | configure:2454: $? = 0
 | configure:2456: gcc -v </dev/null >&5
 | Reading specs from /usr/lib/gcc-lib/i386-redhat-linux/3.2.3/specs
 | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
 --infodir=/usr/share/info --enable-shared --enable-threads=posix
 --disable-checking --with-system-zlib --enable-__cxa_atexit --host=i386
 -redhat-linux
 | Thread model: posix
 | gcc version 3.2.3 20030502 (Red Hat Linux 3.2.3-58)
 | configure:2459: $? = 0
 | configure:2461: gcc -V </dev/null >&5
 | gcc: argument to `-V' is missing
 | configure:2464: $? = 1
 | configure:2487: checking for C compiler default output file name
 | configure:2490: gcc    conftest.c  >&5
 | configure:2493: $? = 0
 | configure:2539: result: a.out
 | configure:2544: checking whether the C compiler works
 | configure:2550: ./a.out
 | configure:2553: $? = 0
 | configure:2570: result: yes
 | configure:2577: checking whether we are cross compiling
 | configure:2579: result: no
 | configure:2582: checking for suffix of executables
 | configure:2584: gcc -o conftest    conftest.c  >&5
 | configure:2587: $? = 0
 | configure:2612: result:
 | configure:2618: checking for suffix of object files
 | configure:2639: gcc -c   conftest.c >&5
 | configure:2642: $? = 0
 | configure:2664: result: o
 | configure:2668: checking whether we are using the GNU C compiler
 | configure:2692: gcc -c   conftest.c >&5
 | configure:2698: $? = 0
 | configure:2702: test -z
 |                        || test ! -s conftest.err
 | configure:2705: $? = 0
 | configure:2708: test -s conftest.o
 | configure:2711: $? = 0
 | configure:2724: result: yes
 | configure:2730: checking whether gcc accepts -g
 | configure:2751: gcc -c -g  conftest.c >&5
 | configure:2757: $? = 0
 | configure:2761: test -z
 |                        || test ! -s conftest.err
 | configure:2764: $? = 0
 | configure:2767: test -s conftest.o
 | configure:2770: $? = 0
 | configure:2781: result: yes
 | configure:2798: checking for gcc option to accept ANSI C
 | configure:2868: gcc  -c -g -O2  conftest.c >&5
 | configure:2874: $? = 0
 | configure:2878: test -z
 |                        || test ! -s conftest.err
 | configure:2881: $? = 0
 | configure:2884: test -s conftest.o
 | configure:2887: $? = 0
 | configure:2905: result: none needed
 | configure:2923: gcc -c -g -O2  conftest.c >&5
 | conftest.c:2: syntax error before "me"
 | configure:2929: $? = 1
 | configure: failed program was:
 | | #ifndef __cplusplus
 | |   choke me
 | | #endif
 | configure:3073: checking for style of include used by make
 | configure:3101: result: GNU
 | configure:3129: checking dependency style of gcc
 | configure:3219: result: gcc3
 | configure:3237: checking for C compiler option -fno-common
 | configure:3264: gcc -c -g -O2  -fno-common conftest.c >&5
 >check_compiler_option.12366 2>&1
 | configure:3270: $? = 0
 | configure:3274: test -z
 |                        || test ! -s conftest.err
 | configure:3277: $? = 0
 | configure:3280: test -s conftest.o
 | configure:3283: $? = 0
 | configure:3297: result: yes
 | configure:3423: checking for C++ compiler version
 | configure:3426: g++ --version </dev/null >&5
 | g++ (GCC) 3.2.3 20030502 (Red Hat Linux 3.2.3-58)
 | Copyright (C) 2002 Free Software Foundation, Inc.
 | This is free software; see the source for copying conditions.  There is
 NO
 | warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
 PURPOSE.
 |
 | configure:3429: $? = 0
 | configure:3431: g++ -v </dev/null >&5
 | Reading specs from /usr/lib/gcc-lib/i386-redhat-linux/3.2.3/specs
 | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
 --infodir=/usr/share/info --enable-shared --enable-threads=posix
 --disable-checking --with-system-zlib --enable-__cxa_atexit --host=i386
 -redhat-linux
 | Thread model: posix
 | gcc version 3.2.3 20030502 (Red Hat Linux 3.2.3-58)
 | configure:3434: $? = 0
 | configure:3436: g++ -V </dev/null >&5
 | g++: argument to `-V' missing
 |
 | configure:3439: $? = 1
 | configure:3442: checking whether we are using the GNU C++ compiler
 | configure:3466: g++ -c   -fno-common conftest.cc >&5
 | configure:3472: $? = 0
 | configure:3476: test -z
 |                        || test ! -s conftest.err
 | configure:3479: $? = 0
 | configure:3482: test -s conftest.o
 | configure:3485: $? = 0
 | configure:3498: result: yes
 | configure:3504: checking whether g++ accepts -g
 | configure:3525: g++ -c -g  -fno-common conftest.cc >&5
 | configure:3531: $? = 0
 | configure:3535: test -z
 |                        || test ! -s conftest.err
 | configure:3538: $? = 0
 | configure:3541: test -s conftest.o
 | configure:3544: $? = 0
 | configure:3555: result: yes
 | configure:3597: g++ -c -g -O2  -fno-common conftest.cc >&5
 | configure:3603: $? = 0
 | configure:3607: test -z
 |                        || test ! -s conftest.err
 | configure:3610: $? = 0
 | configure:3613: test -s conftest.o
 | configure:3616: $? = 0
 | configure:3642: g++ -c -g -O2  -fno-common conftest.cc >&5
 | conftest.cc: In function `int main()':
 | conftest.cc:15: `exit' undeclared (first use this function)
 | conftest.cc:15: (Each undeclared identifier is reported only once for
 each
 |    function it appears in.)
 | configure:3648: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | /* end confdefs.h.  */
 | |
 | | int
 | | main ()
 | | {
 | | exit (42);
 | |   ;
 | |   return 0;
 | | }
 | configure:3597: g++ -c -g -O2  -fno-common conftest.cc >&5
 | configure:3603: $? = 0
 | configure:3607: test -z
 |                        || test ! -s conftest.err
 | configure:3610: $? = 0
 | configure:3613: test -s conftest.o
 | configure:3616: $? = 0
 | configure:3642: g++ -c -g -O2  -fno-common conftest.cc >&5
 | configure:3648: $? = 0
 | configure:3652: test -z
 |                        || test ! -s conftest.err
 | configure:3655: $? = 0
 | configure:3658: test -s conftest.o
 | configure:3661: $? = 0
 | configure:3686: checking dependency style of g++
 | configure:3776: result: gcc3
 | configure:5065: Java SDK home is /home/rw33/tmp.d/jdk1.6.0_01
 | configure:5072: checking for gcj
 | configure:5103: result: /home/rw33/tmp.d/jdk1.6.0_01/bin/javac
 | configure:5120: checking for javadoc
 | configure:5139: found /home/rw33/tmp.d/jdk1.6.0_01/bin/javadoc
 | configure:5151: result: /home/rw33/tmp.d/jdk1.6.0_01/bin/javadoc
 | configure:5165: checking for jar
 | configure:5184: found /home/rw33/tmp.d/jdk1.6.0_01/bin/jar
 | configure:5196: result: /home/rw33/tmp.d/jdk1.6.0_01/bin/jar
 | configure:5210: checking for gij
 | configure:5241: result: /home/rw33/tmp.d/jdk1.6.0_01/bin/java
 | configure:5255: checking for gcjh
 | configure:5286: result: /home/rw33/tmp.d/jdk1.6.0_01/bin/javah
 | configure:5344: checking for gcj
 | configure:5360: found /usr/bin/gcj
 | configure:5370: result: gcj
 | configure:5391: checking dependency style of gcj
 | configure:5481: result: gcc3
 | configure:5572: checking for a sed that does not truncate output
 | configure:5626: result: /bin/sed
 | configure:5640: checking for ld used by gcc
 | configure:5707: result: /usr/bin/ld
 | configure:5716: checking if the linker (/usr/bin/ld) is GNU ld
 | configure:5731: result: yes
 | configure:5736: checking for /usr/bin/ld option to reload object files
 | configure:5743: result: -r
 | configure:5761: checking for BSD-compatible nm
 | configure:5810: result: /usr/bin/nm -B
 | configure:5814: checking whether ln -s works
 | configure:5818: result: yes
 | configure:5825: checking how to recognise dependent libraries
 | configure:6001: result: pass_all
 | configure:6237: checking how to run the C preprocessor
 | configure:6272: gcc -E  -fno-common conftest.c
 | configure:6278: $? = 0
 | configure:6310: gcc -E  -fno-common conftest.c
 | conftest.c:14:28: ac_nonexistent.h: No such file or directory
 | configure:6316: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | /* end confdefs.h.  */
 | | #include <ac_nonexistent.h>
 | configure:6355: result: gcc -E
 | configure:6379: gcc -E  -fno-common conftest.c
 | configure:6385: $? = 0
 | configure:6417: gcc -E  -fno-common conftest.c
 | conftest.c:14:28: ac_nonexistent.h: No such file or directory
 | configure:6423: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | /* end confdefs.h.  */
 | | #include <ac_nonexistent.h>
 | configure:6467: checking for ANSI C header files
 | configure:6492: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6498: $? = 0
 | configure:6502: test -z
 |                        || test ! -s conftest.err
 | configure:6505: $? = 0
 | configure:6508: test -s conftest.o
 | configure:6511: $? = 0
 | configure:6597: gcc -o conftest -g -O2  -fno-common  conftest.c  >&5
 | configure:6600: $? = 0
 | configure:6602: ./conftest
 | configure:6605: $? = 0
 | configure:6620: result: yes
 | configure:6644: checking for sys/types.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for sys/stat.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for stdlib.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for string.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for memory.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for strings.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for inttypes.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for stdint.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6644: checking for unistd.h
 | configure:6660: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6666: $? = 0
 | configure:6670: test -z
 |                        || test ! -s conftest.err
 | configure:6673: $? = 0
 | configure:6676: test -s conftest.o
 | configure:6679: $? = 0
 | configure:6690: result: yes
 | configure:6716: checking dlfcn.h usability
 | configure:6728: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:6734: $? = 0
 | configure:6738: test -z
 |                        || test ! -s conftest.err
 | configure:6741: $? = 0
 | configure:6744: test -s conftest.o
 | configure:6747: $? = 0
 | configure:6757: result: yes
 | configure:6761: checking dlfcn.h presence
 | configure:6771: gcc -E  -fno-common conftest.c
 | configure:6777: $? = 0
 | configure:6797: result: yes
 | configure:6832: checking for dlfcn.h
 | configure:6839: result: yes
 | configure:6862: checking how to run the C++ preprocessor
 | configure:6893: g++ -E  -fno-common conftest.cc
 | configure:6899: $? = 0
 | configure:6931: g++ -E  -fno-common conftest.cc
 | conftest.cc:25:28: ac_nonexistent.h: No such file or directory
 | configure:6937: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | /* end confdefs.h.  */
 | | #include <ac_nonexistent.h>
 | configure:6976: result: g++ -E
 | configure:7000: g++ -E  -fno-common conftest.cc
 | configure:7006: $? = 0
 | configure:7038: g++ -E  -fno-common conftest.cc
 | conftest.cc:25:28: ac_nonexistent.h: No such file or directory
 | configure:7044: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | /* end confdefs.h.  */
 | | #include <ac_nonexistent.h>
 | configure:7094: checking the maximum length of command line arguments
 | configure:7203: result: 32768
 | configure:7214: checking command to parse /usr/bin/nm -B output from gcc
 object
 | configure:7319: g++ -c -g -O2  -fno-common conftest.cc >&5
 | configure:7322: $? = 0
 | configure:7326: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[
 ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[         ][      ]*\([_A-Za-z][_A-
 Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
 | configure:7329: $? = 0
 | configure:7381: g++ -o conftest -g -O2  -fno-common  conftest.cc
 conftstm.o >&5
 | configure:7384: $? = 0
 | configure:7422: result: ok
 | configure:7426: checking for objdir
 | configure:7441: result: .libs
 | configure:7531: checking for ar
 | configure:7547: found /usr/bin/ar
 | configure:7558: result: ar
 | configure:7611: checking for ranlib
 | configure:7627: found /usr/bin/ranlib
 | configure:7638: result: ranlib
 | configure:7691: checking for strip
 | configure:7707: found /usr/bin/strip
 | configure:7718: result: strip
 | configure:7990: checking if gcc supports -fno-rtti -fno-exceptions
 | configure:8011: gcc -c -g -O2  -fno-common -fno-rtti -fno-exceptions
 conftest.c >&5
 | configure:8015: $? = 0
 | configure:8025: result: yes
 | configure:8040: checking for gcc option to produce PIC
 | configure:8250: result: -fPIC
 | configure:8258: checking if gcc PIC flag -fPIC works
 | configure:8279: gcc -c -g -O2  -fno-common -fPIC -DPIC conftest.c >&5
 | configure:8283: $? = 0
 | configure:8293: result: yes
 | configure:8321: checking if gcc static flag -static works
 | configure:8349: result: yes
 | configure:8359: checking if gcc supports -c -o file.o
 | configure:8383: gcc -c -g -O2  -fno-common -o out/conftest2.o conftest.c
 >&5
 | configure:8387: $? = 0
 | configure:8406: result: yes
 | configure:8432: checking whether the gcc linker (/usr/bin/ld) supports
 shared libraries
 | configure:9390: result: yes
 | configure:9411: checking whether -lc should be explicitly linked in
 | configure:9416: gcc -c -g -O2  -fno-common conftest.c >&5
 | configure:9419: $? = 0
 | configure:9434: gcc -shared conftest.o  -v -Wl,-soname -Wl,conftest -o
 conftest 2\>\&1 \| grep  -lc  \>/dev/null 2\>\&1
 | configure:9437: $? = 0
 | configure:9449: result: no
 | configure:9457: checking dynamic linker characteristics
 | configure:10066: result: GNU/Linux ld.so
 | configure:10075: checking how to hardcode library paths into programs
 | configure:10100: result: immediate
 | configure:10114: checking whether stripping libraries is possible
 | configure:10119: result: yes
 | configure:10953: checking if libtool supports shared libraries
 | configure:10955: result: yes
 | configure:10958: checking whether to build shared libraries
 | configure:10979: result: yes
 | configure:10982: checking whether to build static libraries
 | configure:10986: result: yes
 | configure:11078: creating libtool
 | configure:11666: checking for ld used by g++
 | configure:11733: result: /usr/bin/ld
 | configure:11742: checking if the linker (/usr/bin/ld) is GNU ld
 | configure:11757: result: yes
 | configure:11808: checking whether the g++ linker (/usr/bin/ld) supports
 shared libraries
 | configure:12746: result: yes
 | configure:12764: g++ -c -g -O2  -fno-common conftest.cpp >&5
 | configure:12767: $? = 0
 | configure:12886: checking for g++ option to produce PIC
 | configure:13160: result: -fPIC
 | configure:13168: checking if g++ PIC flag -fPIC works
 | configure:13189: g++ -c -g -O2  -fno-common -fPIC -DPIC conftest.cpp >&5
 | configure:13193: $? = 0
 | configure:13203: result: yes
 | configure:13231: checking if g++ static flag -static works
 | configure:13259: result: yes
 | configure:13269: checking if g++ supports -c -o file.o
 | configure:13293: g++ -c -g -O2  -fno-common -o out/conftest2.o
 conftest.cpp >&5
 | configure:13297: $? = 0
 | configure:13316: result: yes
 | configure:13342: checking whether the g++ linker (/usr/bin/ld) supports
 shared libraries
 | configure:13367: result: yes
 | configure:13434: checking dynamic linker characteristics
 | configure:14043: result: GNU/Linux ld.so
 | configure:14052: checking how to hardcode library paths into programs
 | configure:14077: result: immediate
 | configure:17191: checking if gcj supports -fno-rtti -fno-exceptions
 | configure:17226: result: yes
 | configure:17241: checking for gcj option to produce PIC
 | configure:17451: result: -fPIC
 | configure:17459: checking if gcj PIC flag -fPIC works
 | configure:17480: gcj -c -g -O2  -fno-common -fPIC conftest.java >&5
 | configure:17484: $? = 0
 | configure:17494: result: yes
 | configure:17522: checking if gcj static flag -static works
 | configure:17550: result: no
 | configure:17560: checking if gcj supports -c -o file.o
 | configure:17584: gcj -c -g -O2  -fno-common -o out/conftest2.o
 conftest.java >&5
 | configure:17588: $? = 0
 | configure:17607: result: yes
 | configure:17633: checking whether the gcj linker (/usr/bin/ld) supports
 shared libraries
 | configure:18591: result: yes
 | configure:18658: checking dynamic linker characteristics
 | configure:19267: result: GNU/Linux ld.so
 | configure:19276: checking how to hardcode library paths into programs
 | configure:19301: result: immediate
 | configure:20273: checking whether make sets $(MAKE)
 | configure:20293: result: yes
 | configure:20343: checking for ranlib
 | configure:20370: result: ranlib
 | configure:20529: checking for python
 | configure:20547: found /usr/bin/python
 | configure:20559: result: /usr/bin/python
 | configure:20579: checking for python version
 | configure:20586: result: 2.2
 | configure:20598: checking for python platform
 | configure:20605: result: linux2
 | configure:20612: checking for python script directory
 | configure:20620: result: ${prefix}/lib/python2.2/site-packages
 | configure:20629: checking for python extension module directory
 | configure:20637: result: ${exec_prefix}/lib/python2.2/site-packages
 | configure:20712: checking for docbook2pdf
 | configure:20741: result: no
 | configure:20752: checking for docbook2txt
 | configure:20781: result: no
 | configure:20792: checking for tclsh
 | configure:20808: found /usr/bin/tclsh
 | configure:20818: result: tclsh
 | configure:20832: checking for guile
 | configure:20861: result: no
 | configure:20872: checking for latex
 | configure:20888: found /usr/bin/latex
 | configure:20898: result: latex
 | configure:20912: checking for pdflatex
 | configure:20928: found /usr/bin/pdflatex
 | configure:20938: result: pdflatex
 | configure:20952: checking for doxygen
 | configure:20968: found /usr/bin/doxygen
 | configure:20978: result: doxygen
 | configure:20992: checking for dot
 | configure:21021: result: no
 | configure:21055: checking for LIB
 | configure:21084: result: no
 | configure:21283: checking for location of HDF4 libraries
 | configure:21300: result: unknown
 | configure:21366: checking for location of mxml package
 | configure:21372: result: unknown
 | configure:21394: checking for fprintf in -lSystemStubs
 | configure:21424: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lSystemStubs   >&5
 | conftest.c:32: warning: conflicting types for built-in function
 `fprintf'
 | /usr/bin/ld: cannot find -lSystemStubs
 | collect2: ld returned 1 exit status
 | configure:21430: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | /* end confdefs.h.  */
 | |
 | | /* Override any gcc2 internal prototype to avoid an error.  */
 | | #ifdef __cplusplus
 | | extern "C"
 | | #endif
 | | /* We use char because int might match the return type of a gcc2
 | |    builtin and then its argument prototype would still apply.  */
 | | char fprintf ();
 | | int
 | | main ()
 | | {
 | | fprintf ();
 | |   ;
 | |   return 0;
 | | }
 | configure:21456: result: no
 | configure:21472: checking for log in -lm
 | configure:21502: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -lm
 >&5
 | configure:21508: $? = 0
 | configure:21512: test -z
 |                        || test ! -s conftest.err
 | configure:21515: $? = 0
 | configure:21518: test -s conftest
 | configure:21521: $? = 0
 | configure:21534: result: yes
 | configure:21547: checking for xdr_float in -lrpc
 | configure:21577: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -lrpc
 -lm  >&5
 | /usr/bin/ld: cannot find -lrpc
 | collect2: ld returned 1 exit status
 | configure:21583: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | /* end confdefs.h.  */
 | |
 | | /* Override any gcc2 internal prototype to avoid an error.  */
 | | #ifdef __cplusplus
 | | extern "C"
 | | #endif
 | | /* We use char because int might match the return type of a gcc2
 | |    builtin and then its argument prototype would still apply.  */
 | | char xdr_float ();
 | | int
 | | main ()
 | | {
 | | xdr_float ();
 | |   ;
 | |   return 0;
 | | }
 | configure:21609: result: no
 | configure:21621: checking for dlopen in -ldl
 | configure:21651: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -ldl
 -lm  >&5
 | configure:21657: $? = 0
 | configure:21661: test -z
 |                        || test ! -s conftest.err
 | configure:21664: $? = 0
 | configure:21667: test -s conftest
 | configure:21670: $? = 0
 | configure:21683: result: yes
 | configure:21695: checking for gzopen in -lz
 | configure:21725: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -lz
 -ldl -lm  >&5
 | configure:21731: $? = 0
 | configure:21735: test -z
 |                        || test ! -s conftest.err
 | configure:21738: $? = 0
 | configure:21741: test -s conftest
 | configure:21744: $? = 0
 | configure:21757: result: yes
 | configure:21769: checking for jpeg_CreateCompress in -ljpeg
 | configure:21799: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -ljpeg  -lz -ldl -lm  >&5
 | configure:21805: $? = 0
 | configure:21809: test -z
 |                        || test ! -s conftest.err
 | configure:21812: $? = 0
 | configure:21815: test -s conftest
 | configure:21818: $? = 0
 | configure:21831: result: yes
 | configure:21843: checking for SZ_Compress in -lsz
 | configure:21873: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -lsz
 -ljpeg -lz -ldl -lm  >&5
 | /usr/bin/ld: cannot find -lsz
 | collect2: ld returned 1 exit status
 | configure:21879: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | /* end confdefs.h.  */
 | |
 | | /* Override any gcc2 internal prototype to avoid an error.  */
 | | #ifdef __cplusplus
 | | extern "C"
 | | #endif
 | | /* We use char because int might match the return type of a gcc2
 | |    builtin and then its argument prototype would still apply.  */
 | | char SZ_Compress ();
 | | int
 | | main ()
 | | {
 | | SZ_Compress ();
 | |   ;
 | |   return 0;
 | | }
 | configure:21905: result: no
 | configure:21917: checking for Hopen in -ldf
 | configure:21947: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c -ldf
 -ljpeg -lz -ldl -lm  >&5
 | /usr/bin/ld: cannot find -ldf
 | collect2: ld returned 1 exit status
 | configure:21953: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | /* end confdefs.h.  */
 | |
 | | /* Override any gcc2 internal prototype to avoid an error.  */
 | | #ifdef __cplusplus
 | | extern "C"
 | | #endif
 | | /* We use char because int might match the return type of a gcc2
 | |    builtin and then its argument prototype would still apply.  */
 | | char Hopen ();
 | | int
 | | main ()
 | | {
 | | Hopen ();
 | |   ;
 | |   return 0;
 | | }
 | configure:21979: result: no
 | configure:21991: checking for SDcreate in -lmfhdf
 | configure:22021: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lmfhdf  -ljpeg -lz -ldl -lm  >&5
 | /usr/bin/ld: cannot find -lmfhdf
 | collect2: ld returned 1 exit status
 | configure:22027: $? = 1
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | /* end confdefs.h.  */
 | |
 | | /* Override any gcc2 internal prototype to avoid an error.  */
 | | #ifdef __cplusplus
 | | extern "C"
 | | #endif
 | | /* We use char because int might match the return type of a gcc2
 | |    builtin and then its argument prototype would still apply.  */
 | | char SDcreate ();
 | | int
 | | main ()
 | | {
 | | SDcreate ();
 | |   ;
 | |   return 0;
 | | }
 | configure:22053: result: no
 | configure:22065: checking for H5open in -lhdf5
 | configure:22095: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lhdf5  -ljpeg -lz -ldl -lm  >&5
 | configure:22101: $? = 0
 | configure:22105: test -z
 |                        || test ! -s conftest.err
 | configure:22108: $? = 0
 | configure:22111: test -s conftest
 | configure:22114: $? = 0
 | configure:22127: result: yes
 | configure:22139: checking for xmlParseDocument in -lxml2
 | configure:22169: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2  -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:22175: $? = 0
 | configure:22179: test -z
 |                        || test ! -s conftest.err
 | configure:22182: $? = 0
 | configure:22185: test -s conftest
 | configure:22188: $? = 0
 | configure:22201: result: yes
 | configure:22213: checking for ANSI C header files
 | configure:22366: result: yes
 | configure:22382: checking for stdlib.h
 | configure:22387: result: yes
 | configure:22382: checking for string.h
 | configure:22387: result: yes
 | configure:22528: checking for an ANSI C-conforming const
 | configure:22595: gcc -c -g -O2 -Wall -Wno-unused-variable -Wno-sign-
 compare -Wno-comment  -fno-common conftest.c >&5
 | conftest.c: In function `main':
 | conftest.c:60: warning: `t' might be used uninitialized in this function
 | conftest.c:78: warning: `b' might be used uninitialized in this function
 | configure:22601: $? = 0
 | configure:22605: test -z
 |                        || test ! -s conftest.err
 | configure:22608: $? = 0
 | configure:22611: test -s conftest.o
 | configure:22614: $? = 0
 | configure:22625: result: yes
 | configure:22635: checking for size_t
 | configure:22659: gcc -c -g -O2 -Wall -Wno-unused-variable -Wno-sign-
 compare -Wno-comment  -fno-common conftest.c >&5
 | configure:22665: $? = 0
 | configure:22669: test -z
 |                        || test ! -s conftest.err
 | configure:22672: $? = 0
 | configure:22675: test -s conftest.o
 | configure:22678: $? = 0
 | configure:22689: result: yes
 | configure:22701: checking whether struct tm is in sys/time.h or time.h
 | configure:22724: gcc -c -g -O2 -Wall -Wno-unused-variable -Wno-sign-
 compare -Wno-comment  -fno-common conftest.c >&5
 | conftest.c: In function `main':
 | conftest.c:40: warning: statement with no effect
 | configure:22730: $? = 0
 | configure:22734: test -z
 |                        || test ! -s conftest.err
 | configure:22737: $? = 0
 | configure:22740: test -s conftest.o
 | configure:22743: $? = 0
 | configure:22754: result: time.h
 | configure:22770: checking for stdlib.h
 | configure:22775: result: yes
 | configure:22915: checking for GNU libc compatible malloc
 | configure:22944: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:22947: $? = 0
 | configure:22949: ./conftest
 | ./conftest: error while loading shared libraries: libhdf5.so.0: cannot
 open shared object file: No such file or directory
 | configure:22952: $? = 127
 | configure: program exited with status 127
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | #define HAVE_LIBHDF5 1
 | | #define HAVE_LIBXML2 1
 | | #define STDC_HEADERS 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_STDLIB_H 1
 | | /* end confdefs.h.  */
 | | #if STDC_HEADERS || HAVE_STDLIB_H
 | | # include <stdlib.h>
 | | #else
 | | char *malloc ();
 | | #endif
 | |
 | | int
 | | main ()
 | | {
 | | exit (malloc (0) ? 0 : 1);
 | |   ;
 | |   return 0;
 | | }
 | configure:22966: result: no
 | configure:22996: checking for working memcmp
 | configure:23044: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23047: $? = 0
 | configure:23049: ./conftest
 | ./conftest: error while loading shared libraries: libhdf5.so.0: cannot
 open shared object file: No such file or directory
 | configure:23052: $? = 127
 | configure: program exited with status 127
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | #define HAVE_LIBHDF5 1
 | | #define HAVE_LIBXML2 1
 | | #define STDC_HEADERS 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_MALLOC 0
 | | #define malloc rpl_malloc
 | | /* end confdefs.h.  */
 | | #include <stdio.h>
 | | #if HAVE_SYS_TYPES_H
 | | # include <sys/types.h>
 | | #endif
 | | #if HAVE_SYS_STAT_H
 | | # include <sys/stat.h>
 | | #endif
 | | #if STDC_HEADERS
 | | # include <stdlib.h>
 | | # include <stddef.h>
 | | #else
 | | # if HAVE_STDLIB_H
 | | #  include <stdlib.h>
 | | # endif
 | | #endif
 | | #if HAVE_STRING_H
 | | # if !STDC_HEADERS && HAVE_MEMORY_H
 | | #  include <memory.h>
 | | # endif
 | | # include <string.h>
 | | #endif
 | | #if HAVE_STRINGS_H
 | | # include <strings.h>
 | | #endif
 | | #if HAVE_INTTYPES_H
 | | # include <inttypes.h>
 | | #else
 | | # if HAVE_STDINT_H
 | | #  include <stdint.h>
 | | # endif
 | | #endif
 | | #if HAVE_UNISTD_H
 | | # include <unistd.h>
 | | #endif
 | | int
 | | main ()
 | | {
 | |
 | |   /* Some versions of memcmp are not 8-bit clean.  */
 | |   char c0 = 0x40, c1 = 0x80, c2 = 0x81;
 | |   if (memcmp(&c0, &c2, 1) >= 0 || memcmp(&c1, &c2, 1) >= 0)
 | |     exit (1);
 | |
 | |   /* The Next x86 OpenStep bug shows up only when comparing 16 bytes
 | |      or more and with at least one buffer not starting on a 4-byte
 boundary.
 | |      William Lewis provided this test program.   */
 | |   {
 | |     char foo[21];
 | |     char bar[21];
 | |     int i;
 | |     for (i = 0; i < 4; i++)
 | |       {
 | |     char *a = foo + i;
 | |     char *b = bar + i;
 | |     strcpy (a, "--------01111111");
 | |     strcpy (b, "--------10000000");
 | |     if (memcmp (a, b, 16) >= 0)
 | |       exit (1);
 | |       }
 | |     exit (0);
 | |   }
 | |
 | |   ;
 | |   return 0;
 | | }
 | configure:23066: result: no
 | configure:23077: checking whether time.h and sys/time.h may both be
 included
 | configure:23102: gcc -c -g -O2 -Wall -Wno-unused-variable -Wno-sign-
 compare -Wno-comment  -fno-common conftest.c >&5
 | configure:23108: $? = 0
 | configure:23112: test -z
 |                        || test ! -s conftest.err
 | configure:23115: $? = 0
 | configure:23118: test -s conftest.o
 | configure:23121: $? = 0
 | configure:23132: result: yes
 | configure:23149: checking for stdlib.h
 | configure:23154: result: yes
 | configure:23158: checking sys/time.h usability
 | configure:23170: gcc -c -g -O2 -Wall -Wno-unused-variable -Wno-sign-
 compare -Wno-comment  -fno-common conftest.c >&5
 | configure:23176: $? = 0
 | configure:23180: test -z
 |                        || test ! -s conftest.err
 | configure:23183: $? = 0
 | configure:23186: test -s conftest.o
 | configure:23189: $? = 0
 | configure:23199: result: yes
 | configure:23203: checking sys/time.h presence
 | configure:23213: gcc -E  -fno-common conftest.c
 | configure:23219: $? = 0
 | configure:23239: result: yes
 | configure:23274: checking for sys/time.h
 | configure:23281: result: yes
 | configure:23149: checking for unistd.h
 | configure:23154: result: yes
 | configure:23298: checking for alarm
 | configure:23355: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23361: $? = 0
 | configure:23365: test -z
 |                        || test ! -s conftest.err
 | configure:23368: $? = 0
 | configure:23371: test -s conftest
 | configure:23374: $? = 0
 | configure:23386: result: yes
 | configure:23396: checking for working mktime
 | configure:23572: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23575: $? = 0
 | configure:23577: ./conftest
 | ./conftest: error while loading shared libraries: libhdf5.so.0: cannot
 open shared object file: No such file or directory
 | configure:23580: $? = 127
 | configure: program exited with status 127
 | configure: failed program was:
 | | /* confdefs.h.  */
 | |
 | | #define PACKAGE_NAME "NeXus Library"
 | | #define PACKAGE_TARNAME "nexus"
 | | #define PACKAGE_VERSION "4.0rc3"
 | | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | | #define PACKAGE "nexus"
 | | #define VERSION "4.0rc3"
 | | #ifdef __cplusplus
 | | extern "C" void std::exit (int) throw (); using std::exit;
 | | #endif
 | | #define STDC_HEADERS 1
 | | #define HAVE_SYS_TYPES_H 1
 | | #define HAVE_SYS_STAT_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_MEMORY_H 1
 | | #define HAVE_STRINGS_H 1
 | | #define HAVE_INTTYPES_H 1
 | | #define HAVE_STDINT_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_DLFCN_H 1
 | | #define HAVE_LIBM 1
 | | #define HAVE_LIBDL 1
 | | #define HAVE_LIBZ 1
 | | #define HAVE_LIBJPEG 1
 | | #define HAVE_LIBHDF5 1
 | | #define HAVE_LIBXML2 1
 | | #define STDC_HEADERS 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_STRING_H 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_MALLOC 0
 | | #define malloc rpl_malloc
 | | #define TIME_WITH_SYS_TIME 1
 | | #define HAVE_STDLIB_H 1
 | | #define HAVE_SYS_TIME_H 1
 | | #define HAVE_UNISTD_H 1
 | | #define HAVE_ALARM 1
 | | /* end confdefs.h.  */
 | | /* Test program from Paul Eggert and Tony Leneis.  */
 | | #if TIME_WITH_SYS_TIME
 | | # include <sys/time.h>
 | | # include <time.h>
 | | #else
 | | # if HAVE_SYS_TIME_H
 | | #  include <sys/time.h>
 | | # else
 | | #  include <time.h>
 | | # endif
 | | #endif
 | |
 | | #if HAVE_STDLIB_H
 | | # include <stdlib.h>
 | | #endif
 | |
 | | #if HAVE_UNISTD_H
 | | # include <unistd.h>
 | | #endif
 | |
 | | #if !HAVE_ALARM
 | | # define alarm(X) /* empty */
 | | #endif
 | |
 | | /* Work around redefinition to rpl_putenv by other config tests.  */
 | | #undef putenv
 | |
 | | static time_t time_t_max;
 | | static time_t time_t_min;
 | |
 | | /* Values we'll use to set the TZ environment variable.  */
 | | static char *tz_strings[] = {
 | |   (char *) 0, "TZ=GMT0", "TZ=JST-9",
 | |   "TZ=EST+3EDT+2,M10.1.0/00:00:00,M2.3.0/00:00:00"
 | | };
 | | #define N_STRINGS (sizeof (tz_strings) / sizeof (tz_strings[0]))
 | |
 | | /* Fail if mktime fails to convert a date in the spring-forward gap.
 | |    Based on a problem report from Andreas Jaeger.  */
 | | static void
 | | spring_forward_gap ()
 | | {
 | |   /* glibc (up to about 1998-10-07) failed this test. */
 | |   struct tm tm;
 | |
 | |   /* Use the portable POSIX.1 specification
 "TZ=PST8PDT,M4.1.0,M10.5.0"
 | |      instead of "TZ=America/Vancouver" in order to detect the bug even
 | |      on systems that don't support the Olson extension, or don't have
 the
 | |      full zoneinfo tables installed.  */
 | |   putenv ("TZ=PST8PDT,M4.1.0,M10.5.0");
 | |
 | |   tm.tm_year = 98;
 | |   tm.tm_mon = 3;
 | |   tm.tm_mday = 5;
 | |   tm.tm_hour = 2;
 | |   tm.tm_min = 0;
 | |   tm.tm_sec = 0;
 | |   tm.tm_isdst = -1;
 | |   if (mktime (&tm) == (time_t)-1)
 | |     exit (1);
 | | }
 | |
 | | static void
 | | mktime_test1 (now)
 | |      time_t now;
 | | {
 | |   struct tm *lt;
 | |   if ((lt = localtime (&now)) && mktime (lt) != now)
 | |     exit (1);
 | | }
 | |
 | | static void
 | | mktime_test (now)
 | |      time_t now;
 | | {
 | |   mktime_test1 (now);
 | |   mktime_test1 ((time_t) (time_t_max - now));
 | |   mktime_test1 ((time_t) (time_t_min + now));
 | | }
 | |
 | | static void
 | | irix_6_4_bug ()
 | | {
 | |   /* Based on code from Ariel Faigon.  */
 | |   struct tm tm;
 | |   tm.tm_year = 96;
 | |   tm.tm_mon = 3;
 | |   tm.tm_mday = 0;
 | |   tm.tm_hour = 0;
 | |   tm.tm_min = 0;
 | |   tm.tm_sec = 0;
 | |   tm.tm_isdst = -1;
 | |   mktime (&tm);
 | |   if (tm.tm_mon != 2 || tm.tm_mday != 31)
 | |     exit (1);
 | | }
 | |
 | | static void
 | | bigtime_test (j)
 | |      int j;
 | | {
 | |   struct tm tm;
 | |   time_t now;
 | |   tm.tm_year = tm.tm_mon = tm.tm_mday = tm.tm_hour = tm.tm_min =
 tm.tm_sec = j;
 | |   now = mktime (&tm);
 | |   if (now != (time_t) -1)
 | |     {
 | |       struct tm *lt = localtime (&now);
 | |       if (! (lt
 | |          && lt->tm_year == tm.tm_year
 | |          && lt->tm_mon == tm.tm_mon
 | |          && lt->tm_mday == tm.tm_mday
 | |          && lt->tm_hour == tm.tm_hour
 | |          && lt->tm_min == tm.tm_min
 | |          && lt->tm_sec == tm.tm_sec
 | |          && lt->tm_yday == tm.tm_yday
 | |          && lt->tm_wday == tm.tm_wday
 | |          && ((lt->tm_isdst < 0 ? -1 : 0 < lt->tm_isdst)
 | |               == (tm.tm_isdst < 0 ? -1 : 0 < tm.tm_isdst))))
 | |     exit (1);
 | |     }
 | | }
 | |
 | | int
 | | main ()
 | | {
 | |   time_t t, delta;
 | |   int i, j;
 | |
 | |   /* This test makes some buggy mktime implementations loop.
 | |      Give up after 60 seconds; a mktime slower than that
 | |      isn't worth using anyway.  */
 | |   alarm (60);
 | |
 | |   for (time_t_max = 1; 0 < time_t_max; time_t_max *= 2)
 | |     continue;
 | |   time_t_max--;
 | |   if ((time_t) -1 < 0)
 | |     for (time_t_min = -1; (time_t) (time_t_min * 2) < 0; time_t_min *=
 2)
 | |       continue;
 | |   delta = time_t_max / 997; /* a suitable prime number */
 | |   for (i = 0; i < N_STRINGS; i++)
 | |     {
 | |       if (tz_strings[i])
 | |     putenv (tz_strings[i]);
 | |
 | |       for (t = 0; t <= time_t_max - delta; t += delta)
 | |     mktime_test (t);
 | |       mktime_test ((time_t) 1);
 | |       mktime_test ((time_t) (60 * 60));
 | |       mktime_test ((time_t) (60 * 60 * 24));
 | |
 | |       for (j = 1; 0 < j; j *= 2)
 | |     bigtime_test (j);
 | |       bigtime_test (j - 1);
 | |     }
 | |   irix_6_4_bug ();
 | |   spring_forward_gap ();
 | |   exit (0);
 | | }
 | configure:23594: result: no
 | configure:23611: checking for strftime
 | configure:23668: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23674: $? = 0
 | configure:23678: test -z
 |                        || test ! -s conftest.err
 | configure:23681: $? = 0
 | configure:23684: test -s conftest
 | configure:23687: $? = 0
 | configure:23699: result: yes
 | configure:23793: checking for ftime
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for memset
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | conftest.c:68: warning: conflicting types for built-in function `memset'
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for strchr
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | conftest.c:69: warning: conflicting types for built-in function `strchr'
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for strdup
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for strrchr
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | conftest.c:71: warning: conflicting types for built-in function
 `strrchr'
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for strstr
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | conftest.c:72: warning: conflicting types for built-in function `strstr'
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:23793: checking for tzset
 | configure:23850: gcc -o conftest -g -O2 -Wall -Wno-unused-variable -Wno-
 sign-compare -Wno-comment  -fno-common
 -L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib conftest.c
 -lxml2 -lhdf5 -ljpeg -lz -ldl -lm  >&5
 | configure:23856: $? = 0
 | configure:23860: test -z
 |                        || test ! -s conftest.err
 | configure:23863: $? = 0
 | configure:23866: test -s conftest
 | configure:23869: $? = 0
 | configure:23881: result: yes
 | configure:24411: creating ./config.status
 |
 | ## ---------------------- ##
 | ## Running config.status. ##
 | ## ---------------------- ##
 |
 | This file was extended by NeXus Library config.status 4.0rc3, which was
 | generated by GNU Autoconf 2.59.  Invocation command line was
 |
 |   CONFIG_FILES    =
 |   CONFIG_HEADERS  =
 |   CONFIG_LINKS    =
 |   CONFIG_COMMANDS =
 |   $ ./config.status
 |
 | on grid-data.rl.ac.uk
 |
 | config.status:862: creating test/Makefile
 | config.status:862: creating test/atlocal
 | config.status:862: creating Makefile
 | config.status:862: creating nexus.spec
 | config.status:862: creating build_rpm
 | config.status:862: creating include/Makefile
 | config.status:862: creating src/Makefile
 | config.status:862: creating applications/Makefile
 | config.status:862: creating applications/NXdir/Makefile
 | config.status:862: creating applications/NXsummary/Makefile
 | config.status:862: creating applications/NXtranslate/Makefile
 | config.status:862: creating applications/NXtranslate/IPNS_CPP/Makefile
 | config.status:862: creating applications/NXtranslate/FRM2/Makefile
 | config.status:862: creating applications/NXtranslate/opengenie/Makefile
 | config.status:862: creating
 applications/NXtranslate/text_collist/Makefile
 | config.status:862: creating applications/NXtranslate/text_plain/Makefile
 | config.status:862: creating applications/NXtranslate/text_xml/Makefile
 | config.status:862: creating
 applications/NXtranslate/sns_histogram/Makefile
 | config.status:862: creating applications/NXtranslate/loopy/Makefile
 | config.status:862: creating applications/NXtranslate/binary/Makefile
 | config.status:862: creating applications/NXtranslate/spec/Makefile
 | config.status:862: creating applications/NXtranslate/esrf_edf/Makefile
 | config.status:862: creating applications/NXtranslate/docs/Makefile
 | config.status:862: creating examples/Makefile
 | config.status:862: creating doc/Makefile
 | config.status:862: creating doc/doxygen/Makefile
 | config.status:862: creating doc/doxygen/Doxyfile
 | config.status:862: creating doc/api/Makefile
 | config.status:862: creating doc/nxdict/Makefile
 | config.status:862: creating doc/tech_ref/Makefile
 | config.status:862: creating bindings/Makefile
 | config.status:862: creating bindings/f77/Makefile
 | config.status:862: creating bindings/f90/Makefile
 | config.status:862: creating bindings/java/Makefile
 | config.status:862: creating bindings/swig/Makefile
 | config.status:862: creating contrib/Makefile
 | config.status:862: creating contrib/applications/Makefile
 | config.status:862: creating contrib/bindings/Makefile
 | config.status:862: creating scripts/Makefile
 | config.status:862: creating scripts/nexus.pc
 | config.status:862: creating scripts/nxbuild
 | config.status:966: creating include/nxconfig.h
 | config.status:1142: include/nxconfig.h is unchanged
 | config.status:1322: executing depfiles commands
 | config.status:1322: executing test/atconfig commands
 | configure:25934: result:
 |
 | Configuration (NeXus):
 |
 |         Source code location:  .
 |         Version:               4.0rc3
 |         Compiler:              gcc,g++,,
 |
 | build:
 |         NeXus with:
 |                 HDF4 support:  no
 |                 found version
 |                 HDF5 support:  yes
 |                 XML support:   no
 |
 |         bindings:
 |                 F77 :          no (--with-f77=)
 |             F90/F95 :          no (--with-f90=)
 |                 JAVA:          yes (--with-java-
 home=/home/rw33/tmp.d/jdk1.6.0_01)
 |               SWIG:          no
 |
 | Please check whether the configuration I detected matches what you would
 | like to have. If not, re-run configure adding the appropriate  --with
 option
 | or setting the relevant environment variable.
 |
 | For a list of available options type    ./configure --help
 |
 |
 | ## ---------------- ##
 | ## Cache variables. ##
 | ## ---------------- ##
 |
 | ac_cv_build=i686-redhat-linux-gnu
 | ac_cv_build_alias=i686-redhat-linux-gnu
 | ac_cv_c_compiler_gnu=yes
 | ac_cv_c_const=yes
 | ac_cv_cxx_compiler_gnu=yes
 | ac_cv_env_CC_set=set
 | ac_cv_env_CC_value=gcc
 | ac_cv_env_CFLAGS_set=
 | ac_cv_env_CFLAGS_value=
 | ac_cv_env_CPPFLAGS_set=
 | ac_cv_env_CPPFLAGS_value=
 | ac_cv_env_CPP_set=
 | ac_cv_env_CPP_value=
 | ac_cv_env_CXXCPP_set=
 | ac_cv_env_CXXCPP_value=
 | ac_cv_env_CXXFLAGS_set=
 | ac_cv_env_CXXFLAGS_value=
 | ac_cv_env_CXX_set=set
 | ac_cv_env_CXX_value=g++
 | ac_cv_env_F77_set=
 | ac_cv_env_F77_value=
 | ac_cv_env_FCFLAGS_set=
 | ac_cv_env_FCFLAGS_value=
 | ac_cv_env_FC_set=
 | ac_cv_env_FC_value=
 | ac_cv_env_FFLAGS_set=
 | ac_cv_env_FFLAGS_value=
 | ac_cv_env_LDFLAGS_set=
 | ac_cv_env_LDFLAGS_value=
 | ac_cv_env_build_alias_set=
 | ac_cv_env_build_alias_value=
 | ac_cv_env_host_alias_set=
 | ac_cv_env_host_alias_value=
 | ac_cv_env_target_alias_set=
 | ac_cv_env_target_alias_value=
 | ac_cv_exeext=
 | ac_cv_func_alarm=yes
 | ac_cv_func_ftime=yes
 | ac_cv_func_malloc_0_nonnull=no
 | ac_cv_func_memcmp_working=no
 | ac_cv_func_memset=yes
 | ac_cv_func_strchr=yes
 | ac_cv_func_strdup=yes
 | ac_cv_func_strftime=yes
 | ac_cv_func_strrchr=yes
 | ac_cv_func_strstr=yes
 | ac_cv_func_tzset=yes
 | ac_cv_func_working_mktime=no
 | ac_cv_header_dlfcn_h=yes
 | ac_cv_header_inttypes_h=yes
 | ac_cv_header_memory_h=yes
 | ac_cv_header_stdc=yes
 | ac_cv_header_stdint_h=yes
 | ac_cv_header_stdlib_h=yes
 | ac_cv_header_string_h=yes
 | ac_cv_header_strings_h=yes
 | ac_cv_header_sys_stat_h=yes
 | ac_cv_header_sys_time_h=yes
 | ac_cv_header_sys_types_h=yes
 | ac_cv_header_time=yes
 | ac_cv_header_unistd_h=yes
 | ac_cv_host=i686-redhat-linux-gnu
 | ac_cv_host_alias=i686-redhat-linux-gnu
 | ac_cv_lib_SystemStubs_fprintf=no
 | ac_cv_lib_df_Hopen=no
 | ac_cv_lib_dl_dlopen=yes
 | ac_cv_lib_hdf5_H5open=yes
 | ac_cv_lib_jpeg_jpeg_CreateCompress=yes
 | ac_cv_lib_m_log=yes
 | ac_cv_lib_mfhdf_SDcreate=no
 | ac_cv_lib_rpc_xdr_float=no
 | ac_cv_lib_sz_SZ_Compress=no
 | ac_cv_lib_xml2_xmlParseDocument=yes
 | ac_cv_lib_z_gzopen=yes
 | ac_cv_objext=o
 | ac_cv_path_JAR=/home/rw33/tmp.d/jdk1.6.0_01/bin/jar
 | ac_cv_path_JAVA=/home/rw33/tmp.d/jdk1.6.0_01/bin/java
 | ac_cv_path_JAVAC=/home/rw33/tmp.d/jdk1.6.0_01/bin/javac
 | ac_cv_path_JAVADOC=/home/rw33/tmp.d/jdk1.6.0_01/bin/javadoc
 | ac_cv_path_JAVAH=/home/rw33/tmp.d/jdk1.6.0_01/bin/javah
 | ac_cv_path_PYTHON=/usr/bin/python
 | ac_cv_path_install='/usr/bin/install -c'
 | ac_cv_prog_AWK=gawk
 | ac_cv_prog_CPP='gcc -E'
 | ac_cv_prog_CXXCPP='g++ -E'
 | ac_cv_prog_DOXYGEN=doxygen
 | ac_cv_prog_GCJ=gcj
 | ac_cv_prog_LATEX=latex
 | ac_cv_prog_PDFLATEX=pdflatex
 | ac_cv_prog_TCLSH=tclsh
 | ac_cv_prog_ac_ct_AR=ar
 | ac_cv_prog_ac_ct_CC=gcc
 | ac_cv_prog_ac_ct_RANLIB=ranlib
 | ac_cv_prog_ac_ct_STRIP=strip
 | ac_cv_prog_cc_g=yes
 | ac_cv_prog_cc_stdc=
 | ac_cv_prog_cxx_g=yes
 | ac_cv_prog_egrep='grep -E'
 | ac_cv_prog_make_make_set=yes
 | ac_cv_struct_tm=time.h
 | ac_cv_target=i686-redhat-linux-gnu
 | ac_cv_target_alias=i686-redhat-linux-gnu
 | ac_cv_type_size_t=yes
 | am_cv_CC_dependencies_compiler_type=gcc3
 | am_cv_CXX_dependencies_compiler_type=gcc3
 | am_cv_GCJ_dependencies_compiler_type=gcc3
 | am_cv_python_platform=linux2
 | am_cv_python_pyexecdir='${exec_prefix}/lib/python2.2/site-packages'
 | am_cv_python_pythondir='${prefix}/lib/python2.2/site-packages'
 | am_cv_python_version=2.2
 | lt_cv_deplibs_check_method=pass_all
 | lt_cv_file_magic_cmd='$MAGIC_CMD'
 | lt_cv_file_magic_test_file=
 | lt_cv_ld_reload_flag=-r
 | lt_cv_objdir=.libs
 | lt_cv_path_LD=/usr/bin/ld
 | lt_cv_path_LDCXX=/usr/bin/ld
 | lt_cv_path_NM='/usr/bin/nm -B'
 | lt_cv_path_SED=/bin/sed
 | lt_cv_prog_compiler_c_o=yes
 | lt_cv_prog_compiler_c_o_CXX=yes
 | lt_cv_prog_compiler_c_o_GCJ=yes
 | lt_cv_prog_compiler_rtti_exceptions=yes
 | lt_cv_prog_gnu_ld=yes
 | lt_cv_prog_gnu_ldcxx=yes
 | lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
 ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[         ][      ]*\([_A-Za-z][_A-
 Za-z0-9]*\)$/\1 \2 \2/p'\'''
 | lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)
 $/  {\"\1\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \([^ ]*\) \([^ ]*\)$/
 {"\2", (lt_ptr) \&\2},/p'\'''
 | lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^. .* \(.*\)$/extern
 int \1;/p'\'''
 | lt_cv_sys_max_cmd_len=32768
 | lt_lt_cv_prog_compiler_c_o='"yes"'
 | lt_lt_cv_prog_compiler_c_o_CXX='"yes"'
 | lt_lt_cv_prog_compiler_c_o_GCJ='"yes"'
 | lt_lt_cv_sys_global_symbol_pipe='"sed -n -e '\''s/^.*[
 ]\\([ABCDGIRSTW][ABCDGIRSTW]*\\)[       ][      ]*\\([_A-Za-z][_A-
 Za-z0-9]*\\)\$/\\1 \\2 \\2/p'\''"'
 | lt_lt_cv_sys_global_symbol_to_c_name_address='"sed -n -e '\''s/^: \\([^
 ]*\\) \$/  {\\\"\\1\\\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \\([^
 ]*\\) \\([^ ]*\\)\$/  {\"\\2\", (lt_ptr) \\&\\2},/p'\''"'
 | lt_lt_cv_sys_global_symbol_to_cdecl='"sed -n -e '\''s/^. .*
 \\(.*\\)\$/extern int \\1;/p'\''"'
 |
 | ## ----------------- ##
 | ## Output variables. ##
 | ## ----------------- ##
 |
 | ACLOCAL='aclocal-1.6'
 | AMDEPBACKSLASH='\'
 | AMDEP_FALSE='#'
 | AMDEP_TRUE=''
 | AMTAR='${SHELL} /home/rw33/tmp.d/nexus-4.0rc3/config/missing --run tar'
 | AR='ar'
 | AUTOCONF='autoconf'
 | AUTOHEADER='autoheader'
 | AUTOM4TE='${SHELL} /home/rw33/tmp.d/nexus-4.0rc3/config/missing --run
 autom4te'
 | AUTOMAKE='automake-1.6 -a -c'
 | AWK='gawk'
 | CC='gcc'
 | CCDEPMODE='depmode=gcc3'
 | CFLAGS='-g -O2 -Wall -Wno-unused-variable -Wno-sign-compare -Wno-
 comment'
 | CPP='gcc -E'
 | CPPFLAGS=' -fno-common'
 | CXX='g++'
 | CXXCPP='g++ -E'
 | CXXDEPMODE='depmode=gcc3'
 | CXXFLAGS='-g -O2 -Wall -Wno-unused-variable -Wno-sign-compare -Wno-
 comment'
 | CYGPATH_W='echo'
 | DEFS='-DHAVE_CONFIG_H'
 | DEPDIR='.deps'
 | DISTRIBUTION='Red Hat Enterprise Linux ES release 3 (Taroon Update 8)'
 | DOCBOOK2PDF=''
 | DOCBOOK2TXT=''
 | DOT=''
 | DOXYGEN='doxygen'
 | ECHO='echo'
 | ECHO_C=''
 | ECHO_N='-n'
 | ECHO_T=''
 | EGREP='grep -E'
 | EXEEXT=''
 | F77=''
 | FC=''
 | FCFLAGS=' '
 | FCLIBS=''
 | FFLAGS=''
 | FLIBS=''
 | GCJ='gcj'
 | GCJDEPMODE='depmode=gcc3'
 | GCJFLAGS='-g -O2'
 | GUILE=''
 | GUILEROOT=''
 | H4ROOT=''
 | H5ROOT='/home/rw33/tmp.d/hdf5-1.6.5/hdf5/'
 | HAVE_DOCBOOK_FALSE=''
 | HAVE_DOCBOOK_TRUE='#'
 | HAVE_DOT_FALSE=''
 | HAVE_DOT_TRUE='#'
 | HAVE_DOXYGEN_FALSE='#'
 | HAVE_DOXYGEN_TRUE=''
 | HAVE_F77_FALSE=''
 | HAVE_F77_TRUE='#'
 | HAVE_F90_FALSE=''
 | HAVE_F90_TRUE='#'
 | HAVE_GUILE_FALSE=''
 | HAVE_GUILE_TRUE='#'
 | HAVE_HDF4_FALSE=''
 | HAVE_HDF4_TRUE='#'
 | HAVE_HDF5_FALSE='#'
 | HAVE_HDF5_TRUE=''
 | HAVE_JAVAC_FALSE='#'
 | HAVE_JAVAC_TRUE=''
 | HAVE_JAVADOC_FALSE='#'
 | HAVE_JAVADOC_TRUE=''
 | HAVE_JAVA_FALSE='#'
 | HAVE_JAVA_TRUE=''
 | HAVE_LATEX_FALSE='#'
 | HAVE_LATEX_TRUE=''
 | HAVE_LIBXML2_FALSE='#'
 | HAVE_LIBXML2_TRUE=''
 | HAVE_MS_LIB_FALSE=''
 | HAVE_MS_LIB_TRUE='#'
 | HAVE_MZSCHEME_FALSE=''
 | HAVE_MZSCHEME_TRUE='#'
 | HAVE_OPENGENIE_FALSE=''
 | HAVE_OPENGENIE_TRUE='#'
 | HAVE_PDFLATEX_FALSE='#'
 | HAVE_PDFLATEX_TRUE=''
 | HAVE_PYTHON_FALSE=''
 | HAVE_PYTHON_TRUE='#'
 | HAVE_SWIG_FALSE=''
 | HAVE_SWIG_TRUE='#'
 | HAVE_TCL_FALSE=''
 | HAVE_TCL_TRUE='#'
 | HAVE_XML_FALSE=''
 | HAVE_XML_TRUE='#'
 | HDF4_CPPFLAGS=''
 | HDF4_LDFLAGS=''
 | HDF5_CPPFLAGS='-I/home/rw33/tmp.d/hdf5-1.6.5/hdf5//include -DHDF5'
 | HDF5_LDFLAGS='-lhdf5 -lz'
 | INSTALL_DATA='${INSTALL} -m 644'
 | INSTALL_PROGRAM='${INSTALL}'
 | INSTALL_SCRIPT='${INSTALL}'
 | INSTALL_STRIP_PROGRAM='${SHELL} $(install_sh) -c -s'
 | JAR='/home/rw33/tmp.d/jdk1.6.0_01/bin/jar'
 | JAVA='/home/rw33/tmp.d/jdk1.6.0_01/bin/java'
 | JAVAC='/home/rw33/tmp.d/jdk1.6.0_01/bin/javac'
 | JAVACFLAGS=''
 | JAVADOC='/home/rw33/tmp.d/jdk1.6.0_01/bin/javadoc'
 | JAVAH='/home/rw33/tmp.d/jdk1.6.0_01/bin/javah'
 | JAVAINCLUDE='-I/home/rw33/tmp.d/jdk1.6.0_01/include
 -I/home/rw33/tmp.d/jdk1.6.0_01/include/linux'
 | LATEX='latex'
 | LDFLAGS='-L/home/rw33/tmp.d/hdf5-1.6.5/hdf5//lib  -L/usr/local/lib'
 | LIBG2C=''
 | LIBOBJS=' malloc$U.o memcmp$U.o mktime$U.o'
 | LIBS='-lxml2 -lhdf5 -ljpeg -lz -ldl -lm '
 | LIBTOOL='$(SHELL) $(top_builddir)/libtool'
 | LIBXML2_CFLAGS='`xml2-config --cflags`'
 | LN_S='ln -s'
 | LTLIBOBJS=' malloc$U.lo memcmp$U.lo mktime$U.lo'
 | MAKEINFO='${SHELL} /home/rw33/tmp.d/nexus-4.0rc3/config/missing --run
 makeinfo'
 | MINGW_MSYS_FALSE=''
 | MINGW_MSYS_TRUE='#'
 | MS_LIB=''
 | MXMLROOT=''
 | NXDOCDIR='${prefix}/nexus/doc'
 | NXEXAMPLEDIR='${prefix}/nexus/examples'
 | NXTESTDIR='${prefix}/nexus/tests'
 | OBJEXT='o'
 | OPENGENIEROOT=''
 | PACKAGE='nexus'
 | PACKAGE_BUGREPORT='nexus-developers at nexusformat.org'
 | PACKAGE_NAME='NeXus Library'
 | PACKAGE_RELEASE='1'
 | PACKAGE_STRING='NeXus Library 4.0rc3'
 | PACKAGE_TARNAME='nexus'
 | PACKAGE_VERSION='4.0rc3'
 | PATH_SEPARATOR=':'
 | PDFLATEX='pdflatex'
 | PYTHON='/usr/bin/python'
 | PYTHONROOT=''
 | PYTHON_EXEC_PREFIX='${exec_prefix}'
 | PYTHON_PLATFORM='linux2'
 | PYTHON_PREFIX='${prefix}'
 | PYTHON_VERSION='2.2'
 | RANLIB='ranlib'
 | SET_MAKE=''
 | SHARED_LDFLAGS=''
 | SHELL='/bin/sh'
 | STRIP='strip'
 | SWGUILEFLAGS=''
 | SWIG=''
 | TCLROOT=''
 | TCLSH='tclsh'
 | VERSION='4.0rc3'
 | XML_CPPFLAGS=''
 | XML_LDFLAGS=''
 | ac_ct_AR='ar'
 | ac_ct_CC='gcc'
 | ac_ct_CXX=''
 | ac_ct_F77=''
 | ac_ct_FC=''
 | ac_ct_RANLIB='ranlib'
 | ac_ct_STRIP='strip'
 | am__fastdepCC_FALSE='#'
 | am__fastdepCC_TRUE=''
 | am__fastdepCXX_FALSE='#'
 | am__fastdepCXX_TRUE=''
 | am__fastdepGCJ_FALSE='#'
 | am__fastdepGCJ_TRUE=''
 | am__include='include'
 | am__leading_dot='.'
 | am__quote=''
 | am__tar='${AMTAR} chof - "$$tardir"'
 | am__untar='${AMTAR} xf -'
 | bindir='${exec_prefix}/bin'
 | build='i686-redhat-linux-gnu'
 | build_alias=''
 | build_cpu='i686'
 | build_os='linux-gnu'
 | build_vendor='redhat'
 | datadir='${prefix}/share'
 | exec_prefix='${prefix}'
 | host='i686-redhat-linux-gnu'
 | host_alias=''
 | host_cpu='i686'
 | host_os='linux-gnu'
 | host_vendor='redhat'
 | includedir='${prefix}/include'
 | infodir='${prefix}/info'
 | install_sh='/home/rw33/tmp.d/nexus-4.0rc3/config/install-sh'
 | libdir='${exec_prefix}/lib'
 | libexecdir='${exec_prefix}/libexec'
 | localstatedir='${prefix}/var'
 | mandir='${prefix}/man'
 | mkdir_p='mkdir -p --'
 | oldincludedir='/usr/include'
 | pkgpyexecdir='${pyexecdir}/nexus'
 | pkgpythondir='${pythondir}/nexus'
 | prefix='/home/rw33/tmp.d/nexus-4rc3-dist/'
 | program_transform_name='s,x,x,'
 | pyexecdir='${exec_prefix}/lib/python2.2/site-packages'
 | pythondir='${prefix}/lib/python2.2/site-packages'
 | sbindir='${exec_prefix}/sbin'
 | sharedstatedir='${prefix}/com'
 | sysconfdir='${prefix}/etc'
 | target='i686-redhat-linux-gnu'
 | target_alias=''
 | target_cpu='i686'
 | target_os='linux-gnu'
 | target_vendor='redhat'
 |
 | ## ----------- ##
 | ## confdefs.h. ##
 | ## ----------- ##
 |
 | #define HAVE_ALARM 1
 | #define HAVE_DLFCN_H 1
 | #define HAVE_FTIME 1
 | #define HAVE_INTTYPES_H 1
 | #define HAVE_LIBDL 1
 | #define HAVE_LIBHDF5 1
 | #define HAVE_LIBJPEG 1
 | #define HAVE_LIBM 1
 | #define HAVE_LIBXML2 1
 | #define HAVE_LIBZ 1
 | #define HAVE_MALLOC 0
 | #define HAVE_MEMORY_H 1
 | #define HAVE_MEMSET 1
 | #define HAVE_STDINT_H 1
 | #define HAVE_STDLIB_H 1
 | #define HAVE_STDLIB_H 1
 | #define HAVE_STDLIB_H 1
 | #define HAVE_STDLIB_H 1
 | #define HAVE_STRCHR 1
 | #define HAVE_STRDUP 1
 | #define HAVE_STRFTIME 1
 | #define HAVE_STRINGS_H 1
 | #define HAVE_STRING_H 1
 | #define HAVE_STRING_H 1
 | #define HAVE_STRRCHR 1
 | #define HAVE_STRSTR 1
 | #define HAVE_SYS_STAT_H 1
 | #define HAVE_SYS_TIME_H 1
 | #define HAVE_SYS_TYPES_H 1
 | #define HAVE_TZSET 1
 | #define HAVE_UNISTD_H 1
 | #define HAVE_UNISTD_H 1
 | #define PACKAGE "nexus"
 | #define PACKAGE_BUGREPORT "nexus-developers at nexusformat.org"
 | #define PACKAGE_NAME "NeXus Library"
 | #define PACKAGE_STRING "NeXus Library 4.0rc3"
 | #define PACKAGE_TARNAME "nexus"
 | #define PACKAGE_VERSION "4.0rc3"
 | #define STDC_HEADERS 1
 | #define STDC_HEADERS 1
 | #define TIME_WITH_SYS_TIME 1
 | #define VERSION "4.0rc3"
 | #define malloc rpl_malloc
 | #endif
 | #ifdef __cplusplus
 | extern "C" void std::exit (int) throw (); using std::exit;
 |
 | configure: exit 0
 |
 | ## ---------------------- ##
 | ## Running config.status. ##
 | ## ---------------------- ##
 |
 | This file was extended by NeXus Library config.status 4.0rc3, which was
 | generated by GNU Autoconf 2.59.  Invocation command line was
 |
 |   CONFIG_FILES    =
 |   CONFIG_HEADERS  =
 |   CONFIG_LINKS    =
 |   CONFIG_COMMANDS =
 |   $ ./config.status
 |
 | on grid-data.rl.ac.uk
 |
 | config.status:862: creating test/Makefile
 | config.status:862: creating test/atlocal
 | config.status:862: creating Makefile
 | config.status:862: creating nexus.spec
 | config.status:862: creating build_rpm
 | config.status:862: creating include/Makefile
 | config.status:862: creating src/Makefile
 | config.status:862: creating applications/Makefile
 | config.status:862: creating applications/NXdir/Makefile
 | config.status:862: creating applications/NXsummary/Makefile
 | config.status:862: creating applications/NXtranslate/Makefile
 | config.status:862: creating applications/NXtranslate/IPNS_CPP/Makefile
 | config.status:862: creating applications/NXtranslate/FRM2/Makefile
 | config.status:862: creating applications/NXtranslate/opengenie/Makefile
 | config.status:862: creating
 applications/NXtranslate/text_collist/Makefile
 | config.status:862: creating applications/NXtranslate/text_plain/Makefile
 | config.status:862: creating applications/NXtranslate/text_xml/Makefile
 | config.status:862: creating
 applications/NXtranslate/sns_histogram/Makefile
 | config.status:862: creating applications/NXtranslate/loopy/Makefile
 | config.status:862: creating applications/NXtranslate/binary/Makefile
 | config.status:862: creating applications/NXtranslate/spec/Makefile
 | config.status:862: creating applications/NXtranslate/esrf_edf/Makefile
 | config.status:862: creating applications/NXtranslate/docs/Makefile
 | config.status:862: creating examples/Makefile
 | config.status:862: creating doc/Makefile
 | config.status:862: creating doc/doxygen/Makefile
 | config.status:862: creating doc/doxygen/Doxyfile
 | config.status:862: creating doc/api/Makefile
 | config.status:862: creating doc/nxdict/Makefile
 | config.status:862: creating doc/tech_ref/Makefile
 | config.status:862: creating bindings/Makefile
 | config.status:862: creating bindings/f77/Makefile
 | config.status:862: creating bindings/f90/Makefile
 | config.status:862: creating bindings/java/Makefile
 | config.status:862: creating bindings/swig/Makefile
 | config.status:862: creating contrib/Makefile
 | config.status:862: creating contrib/applications/Makefile
 | config.status:862: creating contrib/bindings/Makefile
 | config.status:862: creating scripts/Makefile
 | config.status:862: creating scripts/nexus.pc
 | config.status:862: creating scripts/nxbuild
 | config.status:966: creating include/nxconfig.h
 | config.status:1142: include/nxconfig.h is unchanged
 | config.status:1322: executing depfiles commands
 | config.status:1322: executing test/atconfig commands

-- 
Ticket URL: <http://trac.nexusformat.org/code/ticket/76>
NeXus Data Format Library and Applications <http://www.nexusformat.org/>
NeXus Data Format Library and Applications



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